CDS

Accession Number TCMCG057C56820
gbkey CDS
Protein Id XP_018462962.1
Location join(10287..10424,10727..10852,10925..11240,11319..11864,11958..>12266)
Gene LOC108834099
GeneID 108834099
Organism Raphanus sativus

Protein

Length 713aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018607460.1
Definition PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category G
Description 1-deoxy-D-xylulose-5-phosphate synthase
KEGG_TC -
KEGG_Module M00096        [VIEW IN KEGG]
KEGG_Reaction R05636        [VIEW IN KEGG]
KEGG_rclass RC00032        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01662        [VIEW IN KEGG]
EC 2.2.1.7        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00730        [VIEW IN KEGG]
ko00900        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
map00730        [VIEW IN KEGG]
map00900        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006081        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006090        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006644        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006778        [VIEW IN EMBL-EBI]
GO:0006779        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0008654        [VIEW IN EMBL-EBI]
GO:0008661        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009240        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015994        [VIEW IN EMBL-EBI]
GO:0015995        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016744        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019288        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019682        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0033013        [VIEW IN EMBL-EBI]
GO:0033014        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046148        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046490        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051188        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090407        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTCTGTCTGCATTTGCCTTCCCTTCTTCTTACATAGTAGCCAAAGATTATTGTAAATCAACTTCTCTGTCTTCTTCTTCTAGATCTTTGGCTACAGATCTTCCATCACCATGTCTCAGACCCAACAATTCCCATTCAAACAGAAAGGTAAAAGTGAATGCTTCACTTGTAGAGAAGGGTGAATATTACTCAAACAGACCACCAACCCCATTACTTGACACAATCAATTACCCAATCCACATGAAAAATCTTTCCATCAAGGAACTGAAACAACTTTCTGATGAGCTAAGATCAGATGTGATCTTCAACGTTTCAAAAACCGGTGGACATTTGGGGTCAAGTCTTGGTGTTGTGGAGCTCACCGTGGCGCTTCACTACATTTTCAACACTCCACAGGACAAGATTCTTTGGGATGTTGGTCATCAGTCTTATCCTCACAAGATTCTCACCGGGAGAAGAGGGAAGATGCCGACAATGAGGCAAACCAATGGCCTCTCTGGTTTCACCAAGCGAGGAGAAAGCGAACATGATTGCTTTGGTACCGGACATAGCTCAACCACAATATCTGCTGGCTTAGGAATGGCTGTAGGAAGGGACTTGAAAGGGCAGAGCAACAATGTGATTGCTGTGATTGGTGATGGTGCTATGACAGCAGGGCAAGCTTATGAAGCAATGAACAACGCTGGATATCTAGACTCTGATATGATTGTCATTCTCAATGACAACAAGCAAGTCTCATTACCTACTGCTACTTTAGATGGACCAAGTCCACCTGTTGGAGCCTTGAGCAGTGCTCTTAGTCGGTTGCAGTCAAACCCAGCTCTCAGAGAGTTGAGAGAAGTCGCAAAGGGTGTGACAAAGCAAATAGGCGGGCCAATGCACCAACTGGCTGCTAAGGTAGATGAGTATGCTCGAGGAATGATAAGTGGGACTGGTTCGACACTGTTTGAAGAACTTGGTCTCTACTATATTGGTCCAGTTGATGGACACAACATAGATGATATGGTAGCCATTCTTAAAGAAGTTAAGAGTGCAAGAACCACAGGACCTGTACTTATTCATGTTGTAACAGAGAAGGGTCGTGGTTATCCTTACGCAGAGAGAGCTGATGACAAGTACCATGGTGTTGTGAAATTCGATCCGGCTACGGGTAAACAGTTCAAAAGTAGTAACAAGACTCAGTCTTACACAACTTACTTTGCTGAGGCTTTGGTCGCGGAAGCAGAGGTAGACAAAGATGTTGTTGCAATTCATGCAGCCATGGGAGGTGGGACTGGTTTAAACCTTTTCCAACGTCGCTTCCCTACAAGATGTTTCGATGTGGGAATAGCTGAACAGCATGCAGTTACTTTTGCTGCTGGTTTAGCATGTGAAGGCCTTAAGCCCTTCTGTGCAATCTATTCATCTTTCATGCAGCGTGCTTATGACCAGG
Protein:  
MALSAFAFPSSYIVAKDYCKSTSLSSSSRSLATDLPSPCLRPNNSHSNRKVKVNASLVEKGEYYSNRPPTPLLDTINYPIHMKNLSIKELKQLSDELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGQSNNVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGVTKQIGGPMHQLAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDMVAILKEVKSARTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPATGKQFKSSNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVATASAIDDRPSCFRYPRGNGIGVALPPGNKGVPLEVGKGRILKEGERVALLGYGSAVQSCLGAAVMLQERGLNITVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGSPADQMAEAGLMPSHIAATALSLIGAPWEALY